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Open Ontology Resource Library / eupath

VEuPathDB Ontology (EUPATH)

Selected English labels and exact synonyms from the VEuPathDB Ontology (EUPATH), release 2023-05-30, with source identifiers and spelling preserved. Licensed CC BY 4.0; full attribution is listed under Sources. Under semantic review; not endorsed by the ontology's maintainers.

Curator: Morgan Reed

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Languages shown reflect this page; source translations may cover only some concepts.

English
presence of Streptococcus in lungUnrated
diagnosis of pneumocystosis at patient dischargeUnrated
diagnosis of upper respiratory tract disease at patient dischargeUnrated
Haemophilus influenzae in induced sputum datumUnrated
milk interleukin-17A concentrationUnrated
duration of parasite clearanceUnrated
blood alkaline phosphatase concentrationUnrated
presence of Norovirus GI in feces by real time polymerase chain reaction assayUnrated
lethal insecticide concentration 90 in area density unitUnrated
groin lesion score before treatmentUnrated
bed net not treatedUnrated
number of insecticide-treated bed nets treated less than 6 months agoUnrated
presence of Pseudomonas in bloodUnrated
diagnosis of pleural empyema at patient dischargeUnrated
multiplex qPCR threshold cycle for Rhinovirus in nasopharynx or oropharynxUnrated
presence of Campylobacter coli in fecesUnrated
presence of Cryptococcus in cerebrospinal fluidUnrated
presence of Chilomastix mesnili in feces by microscopy assayUnrated
presence of Rotavirus in feces by enzyme-linked immunosorbent assayUnrated
Psorophora mexicanaUnrated
lethal insecticide concentration 50 in percentUnrated
Haemophilus parainfluenzae in induced sputum datumUnrated
prevalence of wild type Kdr N1575Unrated
multiplex qRT-PCR threshold cycle for Poliovirus 2 in fecesUnrated
diagnosis of bacterial sepsis at patient dischargeUnrated
milk elaidic acid concentrationUnrated
presence of Treponema in blood by venereal disease research laboratory testUnrated
milk lactadherin concentrationUnrated
placenta specimen collection processUnrated
ratio of specimen population mean enzymatic activity to that of reference specimen populationUnrated
presence of Norovirus GI in feces by real time reverse-transcription polymerase chain reaction assayUnrated
duration since last diagnosis of malariaUnrated
relative abundance of order dataUnrated
presence of Metapneumovirus in lungUnrated
blood phosphate concentrationUnrated
information on oral rehydration for diarrhea before visitUnrated
number of pus cells in fecesUnrated
information on informed consent for future use of specimenUnrated
indicator of whether household met WHO diet minimum dietary diversityUnrated
presence of human Poliovirus 2 Sabin in feces by multiplex real time reverse-transcription polymerase chain reaction assayUnrated
symptom since illness began informationUnrated
aggregated clinical data itemUnrated
aggregated sporozoite testing informationUnrated
duration of residence in communityUnrated
multiplex qPCR threshold cycle for Pneumocystis jirovecii in lungUnrated
date of first antibiotic administrationUnrated
milk arachidic acid concentrationUnrated
TaqMan threshold cycle for Enterocytozoon bieneusi in fecesUnrated
presence of Shigella flexneri X variant in fecesUnrated
presence of Clostridioides in fecesUnrated
presence of Chikungunya virus in blood by unspecified assayUnrated
presence of Mycobacterium in cerebrospinal fluidUnrated
presence of Human orthorubulavirus 4 in induced sputum by multiplex real time polymerase chain reaction assayUnrated
presence of Bacteroides fragilis in feces by polymerase chain reaction assayUnrated
province of ThailandUnrated
presence of Blastocystis hominis in feces by microscopy assayUnrated
Acinetobacter in induced sputum datumUnrated
blood activin A concentrationUnrated
pinna lesion score during treatmentUnrated
multiplex qPCR threshold cycle for Human coronavirus HKU1 in nasopharynx or oropharynxUnrated
sum number of female Anopheles with Plasmodium sporozoites in a collectionUnrated
second height measurement datumUnrated
multiplex qPCR threshold cycle for Human respirovirus 3 in lungUnrated
multiplex qPCR threshold cycle for Human respirovirus 1 in nasopharynx or oropharynxUnrated
Cronobacter sakazakii in induced sputum datumUnrated
TaqMan threshold cycle for Norovirus GII in fecesUnrated
calorie intake measurementUnrated
Aeromonas in feces datumUnrated
number of rooms for sleeping in a dwellingUnrated
presence of typhus group in bloodUnrated
presence of Dengue virus in bloodUnrated
hospital admission informationUnrated
presence of Chlamydia pneumoniae in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
sickle hemoglobin genotypeUnrated
stool consistencyUnrated
presence of Haemophilus in induced sputumUnrated
information on health care in hour after baby deliveryUnrated
16S rRNA sequencing assay targeting V1-V2 regionUnrated
date of feces microbiology assayUnrated
presence of Pseudomonas in induced sputumUnrated
presence of Haemophilus parahaemolyticus in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
indicator of whether participant taking third antimalarial medicationUnrated
presence of Picornaviridae in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
presence of Shigella flexneri 2b in fecesUnrated
presence of Shigella flexneri 2a in fecesUnrated
number of unfed female Anopheles funestus in a collectionUnrated
presence of unspecified bacteria in bloodUnrated
absolute abundance of species dataUnrated
diagnosis of viral hepatitis at patient dischargeUnrated
presence of Haemophilus in bloodUnrated
information on diarrheal episodeUnrated
Corynebacterium in induced sputum datumUnrated
Culex whiteiUnrated
aggregated entomological data itemUnrated
indicator of suckling behavior within hour after baby deliveryUnrated
presence of organism in pleural fluidUnrated
diagnosis of leptospirosis at patient dischargeUnrated
numerical household wealth indexUnrated
multiplex qPCR threshold cycle for Rhinovirus in pleural fluidUnrated
prevalence of wild type AChE1 F331Unrated
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