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Open Ontology Resource Library / obib

Ontology for Biobanking (OBIB)

Selected English labels and exact synonyms from the Ontology for Biobanking (OBIB), release 2023-04-05, with source identifiers and spelling preserved. Licensed CC BY 4.0; full attribution is listed under Sources. Under semantic review; not endorsed by the ontology's maintainers.

Curator: Morgan Reed

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Languages shown reflect this page; source translations may cover only some concepts.

English
resected tissue specimen mass measurement datumUnrated
biobank organizationUnrated
comment on FFPE slide imageUnrated
blood specimen container with EDTAUnrated
followup required for specimen collection issueUnrated
pill-based hormonal birth control methodUnrated
normal adjacent tissue released to the biobank in addition to tumor tissueUnrated
date of specimen freezing at -70 to -80 degrees CUnrated
adherence of dehydration process temperature to FFPE tissue processing SOPUnrated
indication of male homosexual sexual activityUnrated
time of completion of blood cell pellet processingUnrated
CTEP organization identifierUnrated
recycled buffered formalin conditionUnrated
microtome maintenance frequencyUnrated
sample collection or study contact personUnrated
clinical history of pneumoniaUnrated
time since last usage of hormonal birth controlUnrated
Location adjacent to tissue fixationUnrated
albumin volume administered intraoperativelyUnrated
data and time FFPE tissue cassette ID was recordedUnrated
administration of intravenous anaestheticUnrated
specimen preparation contactUnrated
specimen donor's date of birthUnrated
non-performance of an assayUnrated
specimen collected with specific collection packetUnrated
specimen transporting organizationUnrated
buffy coat specimenUnrated
date of specimen receipt for pathologist processingUnrated
streetUnrated
right kidney biopsyUnrated
cigarUnrated
collection packet with empty container and unfilled information materialUnrated
bilateral oophorectomyUnrated
case control study designUnrated
time of surgical removal of specimenUnrated
lab technician roleUnrated
panel study designUnrated
specimen IDUnrated
receipt and dissection of surgical specimen SOPUnrated
histologic profile quantitative assessment of tumor slide specimen surface areaUnrated
left lung lobectomyUnrated
name of sample collection responsible or principal investigatorUnrated
blood plasma specimen barcodeUnrated
in vivo intraoperative ischemic periodUnrated
percentage of tumor cellularity by cell count of the entire slide.Unrated
administration of antimicrobial agent during surgeryUnrated
indication of having lived in the United Kingdom during specific time frameUnrated
duration time of smokingUnrated
left lung biopsyUnrated
pre-operative blood specimen collectionUnrated
resolved specimen collection issueUnrated
fresh tissue specimenUnrated
research authorization for post mortem specimen donation not obtained because legally authorized representative did not show up to the appointment as scheduledUnrated
clinical history of dialysisUnrated
first tissue removed timeUnrated
blood specimen on blood spot cardUnrated
participant signed and dated informed consent formUnrated
an indication of illegal injectable drug useUnrated
name of reviewer of pathology case summary report.Unrated
charged glass slide indicatorUnrated
specimen image IDUnrated
total colectomyUnrated
comment on maintenance discrepancy from manufacturer recommendationsUnrated
intra-settlement specification part of address of biobank contactUnrated
blood draw timeUnrated
clinical history of blue or purple spots on skin or mucous membranesUnrated
right hemicolectomyUnrated
high meat diet colorectal cancer risk factorUnrated
physiological measurement dataUnrated
adherence of alcohol stage duration to FFPE tissue processing SOPUnrated
time of first surgical incisionUnrated
sample handling summaryUnrated
FFPE fixation protocolUnrated
surgical ligature processUnrated
date of data entryUnrated
intravenous administration of opioid analgesicUnrated
greater than moderate alcohol consumption historyUnrated
reason for not collecting frozen specimensUnrated
blood specimen collection and processing SOPUnrated
survey dataUnrated
comment on resolved specimen collection issueUnrated
indication of illegal prescription drug useUnrated
humidity in gross room when specimen arrived from ORUnrated
biobank idenfier with ISO 3166-1 alpha-2 codeUnrated
biobank contact roleUnrated
specimen gross appearance of metastatic tumorUnrated
form fillingUnrated
research authorization for post mortem specimen donation not obtained due to religious reasonsUnrated
preoperative intravenous administration of antacidUnrated
research authorization for post mortem specimen donation for a specific tissue or fluidUnrated
cell pellet specimen barcodeUnrated
research authorization documentation for post mortem specimen donationUnrated
adherence of dehydration process duration to FFPE tissue processing SOPUnrated
blood was hemolyzed or not useableUnrated
diseased state specimen datumUnrated
name of reviewing pathologist at organization conducting specimen collectionUnrated
research authorization for post mortem specimen donation not obtained due to surgeon's recommendationUnrated
number of FFPE stages/replicatesUnrated
tissue procurement SOPUnrated
clinical history of inability to have Human Immunodeficiency Virus testing due to hemodilutionUnrated
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