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Open Ontology Resource Library / obib

Ontology for Biobanking (OBIB)

Selected English labels and exact synonyms from the Ontology for Biobanking (OBIB), release 2023-04-05, with source identifiers and spelling preserved. Licensed CC BY 4.0; full attribution is listed under Sources. Under semantic review; not endorsed by the ontology's maintainers.

Curator: Morgan Reed

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Languages shown reflect this page; source translations may cover only some concepts.

English
nicotine materialUnrated
biobankUnrated
indication of time in jailUnrated
percentage of tumor slide specimen stroma by surface areaUnrated
specimen gross appearanceUnrated
intra-settlement specification part of addressUnrated
time specimen left operating roomUnrated
commercial manufacturerUnrated
pipe smoking behaviorUnrated
duration of hormone replacement therapy prior to enrollmentUnrated
name of biobank contact personUnrated
name of person responsible for specimen transportUnrated
comment from specimen receiptUnrated
specimen positionUnrated
anesthesia probe temperature measurement assayUnrated
nicotine gum or lozengeUnrated
first tissue removed dateUnrated
pipe tobaccoUnrated
telephone numberUnrated
activity related to a particular specimen donor was stopped because tissue was benignUnrated
duration of greater than moderate alcohol consumption prior to enrollmentUnrated
blood specimen collectionUnrated
adherence of temperature of clearing agent to FFPE tissue processing SOPUnrated
activity related to a particular specimen donor was stopped because not enough blood collectedUnrated
temperature of specimen collection packet at time of receiptUnrated
left pneumonectomyUnrated
bilateral salpingo-oophorectomyUnrated
research authorization obtainer role for post mortem donation of specimens from a legally authorized representativeUnrated
oven temperature during FFPE tissue section H&E stainingUnrated
comment on notable events during donor surgeryUnrated
contact roleUnrated
left kidney mass excisionUnrated
desired plasma and serum aliquots were obtainedUnrated
freezer rackUnrated
vaginal ring-based hormonal birth control methodUnrated
name of team leader for filling out tissue recovery formUnrated
indication of residence in state-run group home at time of deathUnrated
time of specimen transfer from pathology gross room to a biobankUnrated
study subject survey dataUnrated
time since chemotherapy was received prior to surgeryUnrated
name of person transferring blood plasma specimens to freezerUnrated
FFPE paraffin processing for embedding temperatureUnrated
time in FFPE fixative measurementUnrated
data and time of laboratory receipt of specimenUnrated
settlement part of address of sample collection or study contactUnrated
count of current sampled human study participantUnrated
comment on preparation of FFPE H&E stained slideUnrated
laparoscopic surgical methodUnrated
donor patient registry dataUnrated
FFPE tissue section preparation SOPUnrated
progestin alone hormone replacement therapyUnrated
cryovialUnrated
right kidney mass excisionUnrated
date of FFPE slide review by the pathologistUnrated
FFPE paraffin impregnation methodUnrated
amount of fresh frozen plasma administered intraoperativelyUnrated
date and time FFPE tissue cassette was frozenUnrated
FFPE tissue cassette IDUnrated
dimensions of each specimen meet the criteria specified within the relevant tissue procurement SOPUnrated
date of research protocol approval as determined by an institutional review boardUnrated
FFPE tissue block handling, tracking, and storage SOPUnrated
intrauterine device-based hormonal birth control methodUnrated
fresh venous needle blood specimen collectionUnrated
research authorization for post mortem specimen donation was obtainedUnrated
specimen integrityUnrated
biobank description in englishUnrated
specimen donor intraoperative urine excreted prior to organ excision volume measurement datumUnrated
name of person obtaining authorization from legally authorized representative for post-mortem specimen donationUnrated
name of data entry person for local pathology review formUnrated
name of dissector of normal adjacent tissue to tumor for FFPEUnrated
serology alert associated with specimen donorUnrated
manual FFPE tissue section H&E cover slippingUnrated
a clinical history of contact with someone with smallpoxUnrated
specimen donorUnrated
ascites fluid from specimen donor during surgery volume measurement datumUnrated
comment on exposure to environmental and workplace carcinogensUnrated
post-office boxUnrated
organ temperature measurement assayUnrated
temperature in gross room when specimen arrived from ORUnrated
specimen measurement specificationUnrated
FFPE tissue paraffin embedding SOPUnrated
FFPE freezing by dry ice protocolUnrated
nicotine e-cigaretteUnrated
clinical history of syphilisUnrated
organization conducting specimen collection from organismUnrated
additional tumor specimen was obtained and processed with a particular FFPE fixation delay protocolUnrated
comment from tissue procurementUnrated
clinical history of long term steroid useUnrated
lifelong non-drinker of alcoholUnrated
ink used for marking surgical marginUnrated
FFPE freezing protocolUnrated
left lung mass excisionUnrated
department of biobank contactUnrated
cross sectional study designUnrated
name of data entry person for tissue recovery formUnrated
percentage of tumor content of specimen sent to biobankUnrated
FFPE fixation delay protocolUnrated
clinical history of Hepatitis CUnrated
case IDUnrated
collection packet with empty containerUnrated
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