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Open Ontology Resource Library / obib

Ontology for Biobanking (OBIB)

Selected English labels and exact synonyms from the Ontology for Biobanking (OBIB), release 2023-04-05, with source identifiers and spelling preserved. Licensed CC BY 4.0; full attribution is listed under Sources. Under semantic review; not endorsed by the ontology's maintainers.

Curator: Morgan Reed

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Languages shown reflect this page; source translations may cover only some concepts.

English
specimen transport from OR to gross room issues or deviations from SOPUnrated
time since last usage of hormone replacement therapyUnrated
clinical history of exposure to rabiesUnrated
collection packet with specimenUnrated
reason for not banking pre-operative blood specimenUnrated
central biobankUnrated
normal state specimen datumUnrated
oxygen desaturation epochs prior to organ excision descriptionUnrated
name of sample collection or study contact personUnrated
daily water bath maintenanceUnrated
indication of body piercing from non-professionalUnrated
buffer formula for specimen fixativeUnrated
primary diagnosisUnrated
normal specimenUnrated
clinical history of meningitis at deathUnrated
cryovial specimen barcodeUnrated
biobank proper nameUnrated
pathology ink used on resected tissue specimenUnrated
time of receipt for pathologist processingUnrated
estrogen alone hormone replacement therapyUnrated
name of dissector of parent specimenUnrated
surgical procedureUnrated
time of blood plasma specimen placement on dry iceUnrated
all requirements for an investigation are met enabling release of specimen for shipment.Unrated
placement of tissue cassette in FFPE fixative delay durationUnrated
blood specimen volumeUnrated
laboratory, data analysis, and coordinating center for human specimensUnrated
name of person receiving blood specimen in laboratoryUnrated
Type II diabetes colorectal cancer risk factorUnrated
research authorization for post mortem specimen donation not obtained because legally authorized representative did not agree with the activity of biobankingUnrated
indeterminate serological assay resultUnrated
age interval information for sampled donorsUnrated
adherence to FFPE tissue block storage SOPUnrated
platelet volume administered intraoperativelyUnrated
chewing tobaccoUnrated
time since hormonal therapy was received prior to surgeryUnrated
relationship between person signing research authorization and specimen donorUnrated
sampling specimens for biobankUnrated
blood spot cardUnrated
wedge resection of left lungUnrated
surgical methodUnrated
parent specimen IDUnrated
name of person performing blood drawUnrated
FFPE water bath temperatureUnrated
name of IATA-trained person verifying specimen transportUnrated
sarcomatoid features observed on FFPE slideUnrated
population based study designUnrated
time of receiving specimen transportUnrated
phlebotomist roleUnrated
prosector roleUnrated
temperature regulatingUnrated
right lung lobectomyUnrated
specimen donor intraoperative blood loss volume measurement datumUnrated
time of second clamp for specimen removalUnrated
date and time of blood collectionUnrated
intravenous administration of muscle relaxantUnrated
comment on deviations in specimen dimensions from a tissue procurement SOPUnrated
clinical history of exposure to Severe Acute Respiratory SyndromeUnrated
case report form completion SOPUnrated
name of specimen slide preparation technicianUnrated
comment on FFPE tissue block storageUnrated
internal body temperature measurement assayUnrated
freezer shelfUnrated
first blood draw timeUnrated
blood spot card boxUnrated
current reformed smoker for more than 15 years historyUnrated
time donor body refrigerated measurementUnrated
humidity in lab when blood specimen was receivedUnrated
administration of medication during surgeryUnrated
tissue collection timing and placed in fixative inclusion criterionUnrated
adherence to paraffin impregnation method in FFPE tissue processing SOPUnrated
fresh microtome bladeUnrated
indication of having resided in a Northern European military baseUnrated
comment from blood specimen processingUnrated
filled patient questionnaireUnrated
beginning time of parent specimen dissection.Unrated
postmortem collecting specimen from organismUnrated
FFPE slide consistent with findings of diagnostic pathology reportUnrated
name of person screening specimen donorsUnrated
clinical history of night sweatsUnrated
pre-adjuvant performance status scoreUnrated
specimen donor intraoperative urine excreted at end of surgery volume measurement datumUnrated
manual FFPE tissue section H&E deparaffinizationUnrated
specimen randomization key IDUnrated
fixationUnrated
abdominal surgical methodUnrated
name of person storing specimenUnrated
hysterectomy with right salpingo-oophorectomyUnrated
research authorization for post mortem specimen donationUnrated
FFPE slide meets necrosis percentage and tumor content criteriaUnrated
FFPE tissue section H&E cover slip protocolUnrated
longitudinal study designUnrated
clinical history of Reye's SyndromeUnrated
photograph of tissue was taken in pathology gross roomUnrated
current smoker historyUnrated
form data verification processUnrated
blood additive roleUnrated
cohort study designUnrated
twin study designUnrated
Indication of recent cocaine useUnrated
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