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Open Ontology Resource Library / obib

Ontology for Biobanking (OBIB)

Selected English labels and exact synonyms from the Ontology for Biobanking (OBIB), release 2023-04-05, with source identifiers and spelling preserved. Licensed CC BY 4.0; full attribution is listed under Sources. Under semantic review; not endorsed by the ontology's maintainers.

Curator: Morgan Reed

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Languages shown reflect this page; source translations may cover only some concepts.

English
patch-based hormonal birth control methodUnrated
FFPE tissue section H&E staining protocolUnrated
date on which research authorization was obtained from legally authorized representativeUnrated
identifier for legally authorized representativeUnrated
duration of hormonal birth control use prior to enrollmentUnrated
date that research authorization for post mortem specimen donation was witnessedUnrated
authorization to collect of minimum number of organ/tissue types for a specific study inclusion criterionUnrated
comment from blood specimen collectionUnrated
collection packet identifierUnrated
clinical history of tuberculosisUnrated
nurse anesthetist roleUnrated
specimen gross appearance of tumor edgeUnrated
percentage of cross-sectional surface area of entire slide composed of tumor focusUnrated
clinical history of opportunistic infectionsUnrated
H&E staining equipment maintenance performed and recorded frequencyUnrated
ISO 3166-1 alpha-2 code for sample collection or study contactUnrated
presence of metastatic tumor exclusion criterionUnrated
FFPE paraffin temperatureUnrated
comment on specimen integrity after transportUnrated
laparoscopically assisted vaginal surgical methodUnrated
equipment maintained as per manufacturer recommendationsUnrated
time of specimen freezing at approximately -20 degrees CUnrated
percentage of cross-sectional surface area of entire slide composed of necrotic tissueUnrated
SOP memorandumUnrated
specimen disease state datumUnrated
temperature in lab when blood specimen was receivedUnrated
specimen donor intraoperative urine excreted volume measurement datumUnrated
FFPE clearing agent durationUnrated
pathology research centerUnrated
name of person receiving specimen shipmentUnrated
sample medical recordUnrated
previous colorectal polyps colorectal cancer risk factorUnrated
FFPE alcohol stage durationUnrated
date of specimen placement on dry ice for transportUnrated
number of total human study participant objectiveUnrated
sample collection or study aim descriptionUnrated
name of person processing blood cell pellet specimenUnrated
clinical history of growth hormone useUnrated
specimen measurementUnrated
transplant alert associated with specimen donorUnrated
telephone number of sample collection or study contactUnrated
robotic surgical methodUnrated
approval to proceed with collectionUnrated
manual FFPE tissue section H&E stainingUnrated
anesthesiologist roleUnrated
clinical history of exposure to toxinsUnrated
name of person processing blood plasma specimen aliquotsUnrated
indication of a tattoo from unregulated tattoo parlorUnrated
Duration of fasting by specimen donor prior to surgeryUnrated
cell pellet volumeUnrated
FFPE slide inconsistencies with findings of diagnostic pathology reportUnrated
autolysis value specificationUnrated
date of radiation therapy prior to surgeryUnrated
fixed tissue slide specimenUnrated
indication of having resided in Europe during specific time frameUnrated
age of specimen donor at time that authorization from legally authorized representative was obtainedUnrated
gross appearance of disease in resected tissueUnrated
comment on deviations from water bath daily maintenance SOPUnrated
clinical history of positive blood culturesUnrated
comment on tissue specimen processingUnrated
name of quality control inspector of specimenUnrated
administration of local anaestheticUnrated
positive serological assay resultUnrated
specimen transport from OR to gross room SOPUnrated
right oophorectomyUnrated
comment on gross evaluation of resected tissue specimenUnrated
preparation of FFPE block face for sectioning protocolUnrated
clinical history of dementia of unknown causeUnrated
right nephroureterectomyUnrated
pelvic mass excisionUnrated
time of specimen freezingUnrated
left kidney biopsyUnrated
email address of sample collection or study contactUnrated
right lung mass excisionUnrated
survey executionUnrated
second piece of tumor tissue was collectedUnrated
cigaretteUnrated
right lung biopsyUnrated
survey plan specificationUnrated
indication of performing sexual acts in exchange for money or drugsUnrated
adherence of duration in clearing agent to FFPE tissue processing SOPUnrated
post mortem donor roleUnrated
FFPE dehydration process temperatureUnrated
donor's biological sexUnrated
time in fixative measurementUnrated
in-house manufacturerUnrated
clinical history of osteomyelitisUnrated
ISO 3166-1 alpha-2 codeUnrated
clinical history of encephalitisUnrated
microtome blade ageUnrated
indication of heroin useUnrated
clinical history of cancer at deathUnrated
non-cellular component of tumor slide specimen descriptionUnrated
cessation of cardiac activity deathUnrated
indicator of pelvic washings collected during ovarian surgeryUnrated
blood plasma specimen volumeUnrated
surgical cancer treatmentUnrated
comorbidityUnrated
right pneumonectomyUnrated
administration of steroid during surgeryUnrated
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