VEuPathDB Ontology (EUPATH)

Name: VEuPathDB Ontology (EUPATH)
Published: 2026-11-13T13:31:24.669094Z

Selected English labels and exact synonyms from the VEuPathDB Ontology (EUPATH), release 2023-05-30, with source identifiers and spelling preserved. Licensed CC BY 4.0; full attribution is listed under Sources. Under semantic review; not endorsed by the ontology's maintainers.

Curator: Morgan Reed

Languages shown reflect this page; source translations may cover only some concepts.

English
TaqMan threshold cycle for Shigella flexneri in feces excluding serotype 6Unrated
TaqMan threshold cycle for Cryptosporidium parvum in fecesUnrated
geolocation precision objective of three decimal placesUnrated
presence of Streptococcus pneumoniae in lungUnrated
subcounty of UgandaUnrated
average percent of female Anopheles with Plasmodium sporozoitesUnrated
TaqMan threshold cycle for Rotavirus G3 in fecesUnrated
presence of Picornaviridae in nasopharynx or oropharynx by multiplex real time polymerase chain reaction assayUnrated
presence of Plasmodium in placental blood by microscopy assayUnrated
presence of Hymenolepis diminuta in feces by microscopy assayUnrated
diagnosis of parasitic helminthiasis infectious disease at patient dischargeUnrated
presence of Human metapneumovirus in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
prevalence of Kdr F1534CUnrated
presence of Gammainfluenzavirus in lungUnrated
indicator of household having freezerUnrated
prevalence of wild type Kdr I1532Unrated
presence of bacteria in bloodUnrated
offspring blood microbiology assayUnrated
indicator of household having gas stoveUnrated
multiplex qPCR threshold cycle for Influenza C virus in nasopharynx or oropharynxUnrated
presence of Enterobacter cloacae in induced sputumUnrated
respiratory distress since illness began informationUnrated
parasitized erythrocyte count to total erythrocyte count ratioUnrated
presence of Enterococcus in bloodUnrated
second antibiotic in treatmentUnrated
child's dietUnrated
gametocyte detection protocolUnrated
presence of Streptococcus pneumoniae in nasopharynx or oropharynxUnrated
presence of Bordetella in lungUnrated
geohash 7Unrated
transepidermal water lossUnrated
eukaryote detection and abundance analysis using CORRAL softwareUnrated
multiplex qPCR threshold cycle for Streptococcus pneumoniae in lungUnrated
TaqMan threshold cycle for Salmonella in fecesUnrated
Culex chorleyiUnrated
presence of Rodentolepis nana in feces by microscopy assayUnrated
Plasmodium malariae diagnosis within past yearUnrated
gametocyte density by microscopeUnrated
number of virus species in feces specimenUnrated
presence of Human respirovirus 3 in lung by multiplex real time polymerase chain reaction assayUnrated
geohash codeUnrated
qPCR threshold cycle for Sapovirus in fecesUnrated
information specifying fever self-treated in past 2 weeksUnrated
Aedes washinoiUnrated
multiplex qPCR threshold cycle for Bordetella pertussis in nasopharynx or oropharynxUnrated
Haemophilus influenzae serotype b in induced sputum datumUnrated
Aedes vexans sensu latoUnrated
TaqMan threshold cycle for Ancylostoma in fecesUnrated
days per week at secondary occupationUnrated
multiplex qPCR threshold cycle for Human orthorubulavirus 2 in nasopharynx or oropharynxUnrated
presence of Stenotrophomonas maltophilia in induced sputumUnrated
lab hostUnrated
presence of Shigella flexneri Y in fecesUnrated
multiplex qPCR threshold cycle for Staphylococcus aureus in induced sputumUnrated
indicator of medication administered during health care encounterUnrated
lethal insecticide concentration 95 in parts per notation unitUnrated
normalized number of taxon-specific sequence matchesUnrated
BEI repository identifierUnrated
indicator of household having color televisionUnrated
presence of eukaryote in lungUnrated
presence of Iodamoeba butschlii by microscopy assayUnrated
geolocation precision objective of zero decimal placesUnrated
number of infections with P. vivax in the last yearUnrated
time to reinfectionUnrated
indicator of whether microscopy assay performedUnrated
presence of Hepacivirus C in blood by unspecified assayUnrated
Campylobacter in feces datumUnrated
indicator of bag valve mask ventilation performed during baby deliveryUnrated
take fever suppressant informationUnrated
multiplex qPCR threshold cycle for Human orthorubulavirus 4 in nasopharynx or oropharynxUnrated
lethal insecticide concentration 90 in mass density unitUnrated
presence of Cryptosporidium in feces by real time polymerase chain reaction assayUnrated
TaqMan threshold cycle for Rotavirus G4 in fecesUnrated
Streptococcus sp. group A in induced sputum datumUnrated
number of beds with bednetUnrated
prevalence of Kdr L1014FUnrated
presence of Human orthopneumovirus in induced sputum by multiplex real time polymerase chain reaction assayUnrated
dwelling lot area measurement datumUnrated
presence of Plasmodium vivax by blood sample PCRUnrated
indicator of household having chickUnrated
presence of Influenza B virus in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
presence of Influenza C virus in lung by multiplex real time polymerase chain reaction assayUnrated
traveled within two weeks earlier than third most recent malaria episodeUnrated
presence of bacteria in blood by microscopy assayUnrated
information on dwelling physical characteristicsUnrated
information specifying human or animalUnrated
information on malaria diagnosis and parasite statusUnrated
environment informationUnrated
Giardia in feces by enzyme-linked immunosorbent assay datumUnrated
number of copies of the 2Ru Anopheles gambiae complex chromosomal inversionUnrated
geohash 4Unrated
presence of Influenza A virus in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
Moraxella in induced sputum datumUnrated
TaqMan threshold cycle for Norovirus GI.1 in fecesUnrated
presence of Human coronavirus NL63 in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
multiplex qPCR threshold cycle for Human coronavirus HKU1 in lungUnrated
presence of Giardia in feces by real time polymerase chain reaction assayUnrated
presence of Salmonella enterica enterica serovar Paratyphi A in bloodUnrated
Moraxella catarrhalis in induced sputum datumUnrated
number of non-scheduled visitsUnrated

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