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Open Ontology Resource Library / eupath

VEuPathDB Ontology (EUPATH)

Selected English labels and exact synonyms from the VEuPathDB Ontology (EUPATH), release 2023-05-30, with source identifiers and spelling preserved. Licensed CC BY 4.0; full attribution is listed under Sources. Under semantic review; not endorsed by the ontology's maintainers.

Curator: Morgan Reed

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Languages shown reflect this page; source translations may cover only some concepts.

English
multiplex qPCR threshold cycle for Pneumocystis jirovecii in pleural fluidUnrated
Plasmodium falciparum parasite density by PCRUnrated
presence of virus in nasopharynx or oropharynx by multiplex real time polymerase chain reaction assayUnrated
presence of Beta Streptococcus Group F in pleural fluidUnrated
presence of parasite organism in feces by modified acid-fast stain microscopy assayUnrated
skin pathology scoreUnrated
presence of unspecified pathogen in feces by unspecified assayUnrated
TaqMan threshold cycle for Enterovirus in fecesUnrated
presence of Salmonella in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
number of malaria diagnosis past yearUnrated
presence of Human orthorubulavirus 2 in lung by multiplex real time polymerase chain reaction assayUnrated
virulence score (LDt50)Unrated
salary of secondary economic activityUnrated
Anopheles grabhamiiUnrated
host organismUnrated
number of scheduled visitsUnrated
presence of organism in cerebrospinal fluidUnrated
information on dwelling facilitiesUnrated
presence of Schistosoma mansoni in feces by microscopy assayUnrated
presence of Haemophilus influenzae in lung by multiplex real time polymerase chain reaction assayUnrated
information on health care immediately preceding baby deliveryUnrated
Serratia in induced sputum datumUnrated
prevalence of Rdl A296GUnrated
time of participant first enrolled in a studyUnrated
date of end of second antibiotic treatmentUnrated
Streptococcus in induced sputum datumUnrated
geohash 5Unrated
number of copies of the 2La Anopheles gambiae complex chromosomal inversionUnrated
TaqMan threshold cycle for Entamoeba histolytica in fecesUnrated
maternal urine microbiology datumUnrated
date of defecationUnrated
presence of bacteria in nasopharynx or oropharynxUnrated
number of infections with P. falciparum in lifetimeUnrated
presence of Staphylococcus aureus in nasopharynx or oropharynx by multiplex real time polymerase chain reaction assayUnrated
geolocation obfuscation informationUnrated
blood urea nitrogen concentrationUnrated
presence of Plesiomonas in fecesUnrated
16S rRNA sequencing assay targeting V2 regionUnrated
multiplex qPCR threshold cycle for Human respirovirus 1 in induced sputumUnrated
stream waterUnrated
information on cutting non-food expenses to pay for health careUnrated
presence of eukaryote in maternal urineUnrated
first respiratory rate measurement datumUnrated
maternal milk specimenUnrated
presence of virus in lung by multiplex real time polymerase chain reaction assayUnrated
asexual parasite density by microscopeUnrated
presence of Bordetella pertussis in lung by multiplex real time polymerase chain reaction assayUnrated
presence of bacteria in pleural fluidUnrated
average number of female Anopheles tested for sporozoiteUnrated
information on whether given malaria medication in past 2 weeksUnrated
inverse Simpson-indexed alpha diversity dataUnrated
Pseudomonas in induced sputum datumUnrated
Ascaris lumbricoides in feces by reverse transcription polymerase chain reaction assay datumUnrated
prevalence of wild type Kdr L1014Unrated
blood interleukin-6 concentrationUnrated
presence of Haemophilus influenzae serotype b in lung by multiplex real time polymerase chain reaction assayUnrated
presence of Human metapneumovirus in nasopharynx or oropharynx by multiplex real time polymerase chain reaction assayUnrated
lethal insecticide concentration 95 in mass density unitUnrated
TaqMan threshold cycle for Blastocystis in fecesUnrated
Plasmodium in umbilical cord blood by microscopy assay datumUnrated
TaqMan threshold cycle for Rotavirus G2 in fecesUnrated
TaqMan threshold cycle for Rotavirus G10 in fecesUnrated
TaqMan threshold cycle for Rotavirus G9 in fecesUnrated
presence of Norovirus in feces by multiplex real time reverse-transcription polymerase chain reaction assayUnrated
presence of Adenoviridae in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
16S rRNA sequencing assay targeting V3-V4 regionUnrated
number of clinical visits resulting in a malaria diagnosisUnrated
presence of Shigella flexneri 3b in fecesUnrated
Armigeres magnusUnrated
milk C-C motif chemokine 3 concentrationUnrated
environmental pets or farm animals informationUnrated
location of human subject enrollmentUnrated
multiplex qPCR threshold cycle for Human metapneumovirus in pleural fluidUnrated
visited taluk nameUnrated
diagnosis of cerebral palsy at patient dischargeUnrated
presence of Pseudomonas aeruginosa in induced sputumUnrated
drinking water from pipe into yardUnrated
presence of Haemophilus influenzae in induced sputumUnrated
presence of Salmonella enterica enterica serovar Typhi in bloodUnrated
multiplex qPCR threshold cycle for Influenza B virus in nasopharynx or oropharynxUnrated
lethal insecticide concentration 90 in percentUnrated
information on availabilty of host genetics dataUnrated
infused materialUnrated
diagnosis of typhoid fever at patient dischargeUnrated
presence of Mycobacterium tuberculosis in specimenUnrated
average number of female Anopheles per nightUnrated
specimen source informationUnrated
presence of Moraxella nonliquefaciens in induced sputumUnrated
information on sex of matched caseUnrated
Anopheles natalensisUnrated
presence of Ancylostomatoidea in feces by microscopy assayUnrated
presence of Moraxella in induced sputumUnrated
milk eotaxin concentrationUnrated
presence of Mixed gram-negative rods in induced sputumUnrated
indicator of household having shotgunUnrated
parasite clearance half lifeUnrated
presence of Treponema in bloodUnrated
drinking water from pipe into dwellingUnrated
first antibiotic in treatmentUnrated
multiplex qPCR threshold cycle for Moraxella catarrhalis in induced sputumUnrated
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