VEuPathDB Ontology (EUPATH)

Name: VEuPathDB Ontology (EUPATH)
Published: 2026-11-13T13:31:24.669094Z

Selected English labels and exact synonyms from the VEuPathDB Ontology (EUPATH), release 2023-05-30, with source identifiers and spelling preserved. Licensed CC BY 4.0; full attribution is listed under Sources. Under semantic review; not endorsed by the ontology's maintainers.

Curator: Morgan Reed

Languages shown reflect this page; source translations may cover only some concepts.

English
presence of Citrobacter freundii in induced sputumUnrated
Salmonella in induced sputum datumUnrated
time of rehydrationUnrated
presence of Legionella in lungUnrated
presence of Enterococcus in induced sputumUnrated
diagnosis of epilepsy at patient dischargeUnrated
prevalence of wild type Kdr I1011Unrated
blood interleukin-2 concentrationUnrated
milk gamma-linolenic acid concentrationUnrated
presence of Salmonella enterica subsp. enterica serovar Typhi in induced sputumUnrated
presence of Salmonella enterica subsp. enterica serovar Typhi in fecesUnrated
indicator of household having catUnrated
multiplex qPCR threshold cycle for Human bocavirus in pleural fluidUnrated
presence of Sapovirus in feces by reverse transcription polymerase chain reaction assayUnrated
presence of virus in fecesUnrated
insecticide concentration datumUnrated
time to onsetUnrated
presence of Human coronavirus OC43 in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
presence of parasite organism in feces by microscopy assayUnrated
rapid diagnosis test result as positive or negativeUnrated
geohash 2Unrated
Blantyre coma score sumUnrated
information on whether skin lesion cured after treatmentUnrated
TaqMan threshold cycle for Shigella flexneri 6 in fecesUnrated
presence of Plasmodium ovale in blood by microscopy assayUnrated
geolocation estimation information from curatorUnrated
prevalence of wild type Kdr S989Unrated
duration of fourth most recent tripUnrated
information on diarrhea treatment in health care facilityUnrated
TaqMan threshold cycle for Rotavirus G8 in fecesUnrated
community visited on most recent tripUnrated
presence of Haemophilus parahaemolyticus in nasopharynx or oropharynx by multiplex real time polymerase chain reaction assayUnrated
presence of bacteria in lung by multiplex real time polymerase chain reaction assayUnrated
presence of eukaryote in bloodUnrated
median mid-upper arm circumferenceUnrated
reason for participant withdrawalUnrated
presence of Influenza A virus in lung by multiplex real time polymerase chain reaction assayUnrated
indicator of whether participant taking initial antimalarial medicationUnrated
presence of Plasmodium in bloodUnrated
presence of Klebsiella in induced sputumUnrated
lethal insecticide concentration 99Unrated
presence of Enterobacter in induced sputumUnrated
drinking water derived from rainwaterUnrated
presence of Enterobacter cloacae in bloodUnrated
subnational region relocated from within past 12 monthsUnrated
indicator of whether Giardia ELISA performedUnrated
blood interleukin-10 concentrationUnrated
presence of eukaryote in umbilical cord bloodUnrated
multiplex qPCR threshold cycle for Mycoplasmoides pneumoniae in induced sputumUnrated
symptom in last seven days informationUnrated
presence of Human orthorubulavirus 4 in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
presence of parasiteUnrated
presence of Streptococcus pneumoniae in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
Culex alisUnrated
prevalence of Kdr I1532TUnrated
diagnosis of otitis media at patient dischargeUnrated
time of most recent bednet treatmentUnrated
TaqMan threshold cycle for Schistosoma in fecesUnrated
population fraction with greater enzymatic activity than 99th percentile of reference populationUnrated
fungal taxon detected by sequence matchUnrated
multiplex qPCR threshold cycle for Human respirovirus 3 in induced sputumUnrated
domesticated animal in a human dwellingUnrated
milk palmitelaidic acid concentrationUnrated
presence of Klebsiella aerogenes in induced sputumUnrated
categorical duration of bed net ownershipUnrated
duration of abdominal painUnrated
multiplex qPCR threshold cycle for Adenoviridae in lungUnrated
Shigella flexneri non-typeable in feces datumUnrated
dwelling identifierUnrated
Anopheles nuneztovari sensu latoUnrated
TaqMan threshold cycle for Plesiomonas in fecesUnrated
presence of Entamoeba coli in feces by microscopy assayUnrated
presence of Human coronavirus NL63 in induced sputum by multiplex real time polymerase chain reaction assayUnrated
presence of Giardia in feces by microscopy assayUnrated
artesunate/pyrimethamine/sulphadoxine combination as most recent malaria treatmentUnrated
diagnosis of malaria at patient dischargeUnrated
presence of Astrovirus in feces by real time polymerase chain reaction assayUnrated
indicator of whether blood smear performedUnrated
time parasitemia startedUnrated
milk linoleic acid concentrationUnrated
information on original or follow up specimen collectionUnrated
duration of jaundiceUnrated
presence of Shigella flexneri 3a in fecesUnrated
iPCR datumUnrated
subnational region visited within past 12 monthsUnrated
diagnosis of neonatal asphyxia at patient dischargeUnrated
family identifierUnrated
prevalence of Kdr F1534SUnrated
household identifierUnrated
human study subject identifierUnrated
presence of organism in umbilical cord bloodUnrated
region of MaliUnrated
presence of Cytomegalovirus in pleural fluid by multiplex real time polymerase chain reaction assayUnrated
milk interleukin-8 concentrationUnrated
indicator of whether antibiotics given to mother of participantUnrated
presence of Schistosoma mansoni in maternal urine by microscopy assayUnrated
presence of Mycoplasmoides pneumoniae in nasopharynx or oropharynx by multiplex real time polymerase chain reaction assayUnrated
diagnosis of extrapulmonary tuberculosis at hospital admissionUnrated
Pseudomonas aeruginosa in induced sputum datumUnrated
Coliform Bacteria in induced sputum datumUnrated

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